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Licensed to the Apache Software Foundation (ASF) under one or more contributor license agreements. See the NOTICE file distributed with this work for additional information regarding copyright ownership. The ASF licenses this file to you under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License.
import  org.cleartk.timeml.type.Anchor;
import  org.cleartk.timeml.type.TemporalLink;
  static HashSet<StringctkRels = new HashSet<String>();
  public void process(JCas jCasthrows AnalysisEngineProcessException {
    for(TemporalLink link :, TemporalLink.class)){
      BinaryTextRelation rel = new BinaryTextRelation(jCas);
      RelationArgument arg1 = new RelationArgument(jCas);
      Anchor source = link.getSource();
      arg1.setArgument(new Annotation(jCassource.getBegin(), source.getEnd()));
      RelationArgument arg2 = new RelationArgument(jCas);
      Anchor target = link.getTarget();
      arg2.setArgument(new Annotation(jCastarget.getBegin(), target.getEnd()));
      String cat = getMappedCategory(link.getRelationType());
        rel.setCategory(cat.substring(0, cat.length()-2));
    return AnalysisEngineFactory.createEngineDescription(ClearTKLinkToTHYMELinkAnnotator.class);
  private static String getMappedCategory(String cleartkCat){
      ..println("New relation: " + cleartkCat);
      return "BEFORE-1";
    }else if(cleartkCat.equals("INCLUDES")){
      return "CONTAINS";
    }else if(cleartkCat.equals("IS_INCLUDED")){
      return "CONTAINS-1";
      return cleartkCat;
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